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89beb59
Debug anchor 2
JoshuaSBrown Jan 9, 2025
43ae584
Debug anchor 3
JoshuaSBrown Jan 9, 2025
f617273
Debug anchor 4
JoshuaSBrown Jan 9, 2025
e7dae65
Debug anchor 5
JoshuaSBrown Jan 9, 2025
a8f9f09
Debug 6
JoshuaSBrown Jan 9, 2025
58d78e0
Debug 7
JoshuaSBrown Jan 9, 2025
dbf0912
Debug 8
JoshuaSBrown Jan 9, 2025
0b71b00
Fix names of containers from gcs-authz to gcs
JoshuaSBrown Jan 9, 2025
680c41e
Cleanup add comment back in
JoshuaSBrown Jan 9, 2025
a8a6a47
Update common.yml
JoshuaSBrown Jan 9, 2025
28918ef
Remove Exports
JoshuaSBrown Jan 9, 2025
5e52a0a
Merge pull request #1221 from ORNL/1219-daps-bug-gitlab-ci-gcs-log
JoshuaSBrown Jan 9, 2025
238fc1b
Update data_router.js
JoshuaSBrown Jan 9, 2025
7afcbb8
Update repo_router.js
JoshuaSBrown Jan 9, 2025
57de21a
Update task_router.js
JoshuaSBrown Jan 9, 2025
1028adb
Update eslint.config.js
JoshuaSBrown Jan 9, 2025
f2214f1
Update eslint.config.js
JoshuaSBrown Jan 9, 2025
1dd9821
Merge branch 'devel' into 1216-DAPS-feature-add-improved-ci-scanning
JoshuaSBrown Jan 9, 2025
42e174b
Merge branch 'devel' into 1209-feature-add-jsdoc-linter
JoshuaSBrown Jan 9, 2025
a1e15d0
fix jsdoc comment in posix path
JoshuaSBrown Jan 9, 2025
b3ccd1c
Address JSDOc complaints
JoshuaSBrown Jan 9, 2025
2ac3869
Address JSDoc errors
JoshuaSBrown Jan 9, 2025
32ca96e
Address linter
JoshuaSBrown Jan 9, 2025
0aff63a
Address linter errors
JoshuaSBrown Jan 9, 2025
c97251a
Fix order of parameters
JoshuaSBrown Jan 9, 2025
6ca1ee2
Apply formatting
JoshuaSBrown Jan 9, 2025
7555914
Merge pull request #1196 from ORNL/add-support-for-authz-lookup
JoshuaSBrown Jan 9, 2025
eb5f961
Merge branch '1180-refactor-authz' of github.com:ORNL/DataFed into 11…
JoshuaSBrown Jan 11, 2025
d85dccb
Add missing argument form strategy method call
JoshuaSBrown Jan 13, 2025
2f6e767
Merge branch '1180-refactor-authz' of github.com:ORNL/DataFed into 11…
JoshuaSBrown Jan 13, 2025
ad3f203
Apply prettier
JoshuaSBrown Jan 13, 2025
604fb5d
Update posix_path.js
JoshuaSBrown Jan 13, 2025
fbe4323
Address ai suggestion about better error message
JoshuaSBrown Jan 13, 2025
52838c9
Debugging log failure
JoshuaSBrown Jan 8, 2025
73e1be3
Account for multiple images returned in log
JoshuaSBrown Jan 9, 2025
fb88293
Update .gitlab/common.yml
JoshuaSBrown Jan 9, 2025
93ab582
Debugging log container matching
JoshuaSBrown Jan 9, 2025
8209957
Fix typo in gitlab anchor
JoshuaSBrown Jan 9, 2025
ccfc6b6
Debug escape anchor
JoshuaSBrown Jan 9, 2025
00c1d5c
Debug
JoshuaSBrown Jan 9, 2025
6222b54
Debug anchor 2
JoshuaSBrown Jan 9, 2025
3f1344c
Debug anchor 3
JoshuaSBrown Jan 9, 2025
34b015d
Debug anchor 4
JoshuaSBrown Jan 9, 2025
7ecee16
Debug anchor 5
JoshuaSBrown Jan 9, 2025
3813182
Debug 6
JoshuaSBrown Jan 9, 2025
85a3799
Debug 7
JoshuaSBrown Jan 9, 2025
f110c75
Debug 8
JoshuaSBrown Jan 9, 2025
e901493
Fix names of containers from gcs-authz to gcs
JoshuaSBrown Jan 9, 2025
6cf6fcd
Cleanup add comment back in
JoshuaSBrown Jan 9, 2025
141b257
Update common.yml
JoshuaSBrown Jan 9, 2025
286351e
Remove Exports
JoshuaSBrown Jan 9, 2025
2d55899
Cleanup comments and apply formatting
JoshuaSBrown Jan 13, 2025
c4dd784
Update nlhoman json version
JoshuaSBrown Jan 13, 2025
c9722c2
Update protobuf versions
JoshuaSBrown Jan 13, 2025
655fee0
Merge pull request #1218 from ORNL/1216-DAPS-feature-add-improved-ci-…
JoshuaSBrown Jan 13, 2025
3fb41c0
Add tests for authz router
JoshuaSBrown Jan 14, 2025
e1a2048
Specify ubuntu 20.04 explicitly
JoshuaSBrown Jan 14, 2025
62abbc6
Revert dependency versions
JoshuaSBrown Jan 14, 2025
0048e84
Fix problems with path consistent method
JoshuaSBrown Jan 14, 2025
431b090
Merge pull request #1227 from ORNL/1126-fix-json-nlhoman-bug
JoshuaSBrown Jan 14, 2025
67de479
Merge branch 'devel' into 1180-refactor-authz
JoshuaSBrown Jan 14, 2025
077dd67
Cleanup javascript
JoshuaSBrown Jan 14, 2025
ce5d2ad
Format javascript
JoshuaSBrown Jan 14, 2025
de98a85
Feature DLT 1127 relay new token data (#1217)
t-ramz Jan 14, 2025
2065742
[DLT-1110] Update files with prettier
AronPerez Dec 16, 2024
bc08132
[DLT-1110] Split branches
AronPerez Jan 3, 2025
60e7532
[DLT-1110] Update model, make logic private, remove controller form t…
AronPerez Jan 9, 2025
f7032d6
[DLT-1110] Add commnets to logic
AronPerez Jan 9, 2025
8807286
[DLT-1110] Correct HTML escape, francy tree init
AronPerez Jan 10, 2025
eb25b64
[DLT-1110] Pull out template HTML
AronPerez Jan 10, 2025
626c79d
[DLT-1110] Fix update bug
AronPerez Jan 11, 2025
870f1fc
[DLT-1110] Dependency injection
AronPerez Jan 14, 2025
3679a4f
[DLT-1110] Update if statements
AronPerez Jan 14, 2025
474673e
[DLT-1110] Update style
AronPerez Jan 14, 2025
48199c5
Merge pull request #1208 from ORNL/feat/DLT-1110/mapped-collection-en…
AronPerez Jan 14, 2025
f12bbc3
Revert "[DLT-1110] Mapped Collection Endpoint Browse (1/4)"
AronPerez Jan 14, 2025
80f5201
Merge pull request #1231 from ORNL/revert-1208-feat/DLT-1110/mapped-c…
AronPerez Jan 14, 2025
d8985b8
Merge branch 'devel' into 1209-feature-add-jsdoc-linter
JoshuaSBrown Jan 14, 2025
4bd8cab
Merge pull request #1210 from ORNL/1209-feature-add-jsdoc-linter
JoshuaSBrown Jan 15, 2025
76da5d7
Merge branch 'devel' into 1180-refactor-authz
JoshuaSBrown Jan 15, 2025
21c3ee7
Address eslint
JoshuaSBrown Jan 15, 2025
0f078c2
Address remaining eslint items
JoshuaSBrown Jan 15, 2025
39814b4
Fix bug on task_router.js abort function (#1234)
t-ramz Jan 15, 2025
33c44e9
Address Aaron feedback
JoshuaSBrown Jan 15, 2025
5c70a5e
applied potential fix to deprecation warning
nedvedba Jan 16, 2025
8866891
Reorder createRecord
JoshuaSBrown Jan 16, 2025
4e20244
Apply formatting
JoshuaSBrown Jan 16, 2025
443ee5f
Throw error if OpenStack error code returned from API
JoshuaSBrown Jan 16, 2025
3a50b2f
Add dependency between logs
JoshuaSBrown Jan 16, 2025
03aa9a6
Add dependencies on end to end jobs as well
JoshuaSBrown Jan 16, 2025
df1e436
Job rule is not supported
JoshuaSBrown Jan 16, 2025
ebecfab
Remove always run log
JoshuaSBrown Jan 16, 2025
3222810
add end to end signal job
JoshuaSBrown Jan 16, 2025
23eca53
Fix tag of signal
JoshuaSBrown Jan 16, 2025
812c2bf
Merge pull request #1238 from ORNL/1236-bug-job-not-failing-with-setu…
JoshuaSBrown Jan 16, 2025
5ca6bcf
Merge branch 'devel' into 1180-refactor-authz
JoshuaSBrown Jan 16, 2025
049a4f4
Merge branch '1236-bug-job-not-failing-with-setup-script' into devel
JoshuaSBrown Jan 16, 2025
c7cdae3
Merge branch 'devel' into 1180-refactor-authz
JoshuaSBrown Jan 16, 2025
e7972b8
Merge pull request #1224 from ORNL/1180-refactor-authz
JoshuaSBrown Jan 17, 2025
beb78ca
Feature DLT 1120 retrieve transfer token (#1228)
t-ramz Jan 22, 2025
fcf4780
Bug daps 1243 datafed web logging (#1251)
t-ramz Jan 23, 2025
45eb9bf
[DLT-1110] Mapped Collection Endpoint Browse (1/4) (#1240)
AronPerez Jan 23, 2025
1d041f5
added updated version t0 requirements.txt
nedvedba Jan 23, 2025
4f86a90
Fix edge case in GridFTP Authz where '/' is used
JoshuaSBrown Jan 27, 2025
fdc8f3c
cpp-py-formatter
Jan 27, 2025
2aaca81
Add changelog comment
JoshuaSBrown Jan 27, 2025
c44ed18
Merge branch '1257-bug-authz-root-path-stripping-leading-forward-slas…
JoshuaSBrown Jan 27, 2025
1ded325
Address prettier formatting
JoshuaSBrown Jan 27, 2025
eb92f7b
Merge pull request #1258 from ORNL/1257-bug-authz-root-path-stripping…
JoshuaSBrown Jan 27, 2025
3a47ffd
Add method for testing config, fix bug in global config, fix redundan…
JoshuaSBrown Jan 28, 2025
0e1fc90
Make error detection clearer in bool
JoshuaSBrown Jan 28, 2025
ebc4ff6
Add mock core server
JoshuaSBrown Jan 28, 2025
c150f5d
Add integration and, liveness test for mock
JoshuaSBrown Jan 28, 2025
b601f1c
Address mock integration setup and consolidate
JoshuaSBrown Jan 29, 2025
1043226
Apply formatting
JoshuaSBrown Jan 29, 2025
2b550c1
Remove unused timeout variable from mock
JoshuaSBrown Jan 29, 2025
8c6f3a0
Address JSDoc complaints
JoshuaSBrown Jan 29, 2025
1c14b10
Apply prettier
JoshuaSBrown Jan 29, 2025
44e99b9
Fix formatting and eslint prettier issues
JoshuaSBrown Jan 29, 2025
5ab5fb3
Address codacy feedback
JoshuaSBrown Jan 29, 2025
a763b4c
Add changelog comment
JoshuaSBrown Jan 29, 2025
e39988d
Merge branch 'devel' into 1255-feature-mock-core-server-integration-t…
JoshuaSBrown Jan 29, 2025
cac82e3
Merge pull request #1262 from ORNL/1261-fix-JSDoc-errors
JoshuaSBrown Jan 29, 2025
968a52b
Clean up grammar in comment
JoshuaSBrown Jan 29, 2025
3010be2
Add note in Config.h
JoshuaSBrown Jan 29, 2025
ce5e14d
Apply clang formatting
JoshuaSBrown Jan 29, 2025
9f899ff
Fix merge conflict
JoshuaSBrown Jan 29, 2025
763231c
Address merge conflict
JoshuaSBrown Jan 29, 2025
9e447ce
Address codacy issues
JoshuaSBrown Jan 29, 2025
1b2ebf6
Merge pull request #1260 from ORNL/1255-feature-mock-core-server-inte…
JoshuaSBrown Jan 29, 2025
bf39513
Add env var
JoshuaSBrown Jan 31, 2025
7b9e415
Update Arangodb packaged version to using 3.12.4
JoshuaSBrown Jan 31, 2025
c99eefb
Fix confusion in key uses in end to end tests
JoshuaSBrown Jan 31, 2025
714381f
Add change log comment
JoshuaSBrown Feb 1, 2025
5ab82dc
Add changelog comment
JoshuaSBrown Feb 1, 2025
1b0583a
Merge pull request #1274 from ORNL/1273-bug-ci-wrong-key
JoshuaSBrown Feb 1, 2025
7669be9
corrected imported member
nedvedba Feb 3, 2025
f8f7b5d
Merge pull request #1271 from ORNL/1269-bug-premature-shutdown-arango…
JoshuaSBrown Feb 3, 2025
840577a
Merge branch 'devel' into 1268-bug-foxx-docker-file-unbound-env-var
JoshuaSBrown Feb 3, 2025
68018f5
Add compose entries for foxx tests
JoshuaSBrown Feb 3, 2025
9516014
Merge branch 'devel' into 1268-bug-foxx-docker-file-unbound-env-var
JoshuaSBrown Feb 3, 2025
692df8d
Merge pull request #1270 from ORNL/1268-bug-foxx-docker-file-unbound-…
JoshuaSBrown Feb 3, 2025
d24ddb5
Update the schema documentation to improve the usability.
JoshuaSBrown Feb 4, 2025
1a676fb
Add example schema with a reference
JoshuaSBrown Feb 4, 2025
95f8a20
Add notebook for linting jupyter
JoshuaSBrown Feb 5, 2025
4814cdc
Using working directory option
JoshuaSBrown Feb 5, 2025
fceebfc
Update .github/workflows/jupyternotebook-lint.yml
JoshuaSBrown Feb 5, 2025
eeaa6f3
Update python notebooks
JoshuaSBrown Feb 5, 2025
640405c
Attempt to fix jupyternote book linting errors
JoshuaSBrown Feb 7, 2025
340d2f1
Format with black
JoshuaSBrown Feb 7, 2025
e999eab
Specify line length with black to be consistent with flake8
JoshuaSBrown Feb 7, 2025
f5c70a9
Merge pull request #1291 from ORNL/1290-bug-fix-jupyternotebook-docs
JoshuaSBrown Feb 7, 2025
098a79e
Add a Changelog comment
JoshuaSBrown Feb 7, 2025
5559799
Change line length to 88
JoshuaSBrown Feb 7, 2025
2573dd2
Add black formatters
JoshuaSBrown Feb 7, 2025
ee9e283
Make formatting consistent across project
JoshuaSBrown Feb 7, 2025
6a1bf18
Fix linter
JoshuaSBrown Feb 7, 2025
e90c959
Temporarily keep line length in black to 79 and address in separate i…
JoshuaSBrown Feb 7, 2025
b7d649a
Change line length to 88 for now
JoshuaSBrown Feb 7, 2025
d204783
Merge pull request #1286 from ORNL/1280-docs-improve-user-docs-for-sc…
JoshuaSBrown Feb 10, 2025
d2c79bc
updated changelog
nedvedba Feb 10, 2025
3dc995f
Merge branch 'devel' into fix-1223
nedvedba Feb 10, 2025
13f4b1a
Merge pull request #1289 from ORNL/1288-notebook-linter
JoshuaSBrown Feb 10, 2025
5894201
Merge branch 'devel' into fix-1223
nedvedba Feb 10, 2025
b14a772
Merge pull request #1239 from ORNL/fix-1223
nedvedba Feb 10, 2025
90ed49d
Fix bug in CI scripts associated with repo and gcs image build
JoshuaSBrown Feb 10, 2025
ed6bca9
Merge pull request #1298 from ORNL/1297-bug-repo-gcs-image
JoshuaSBrown Feb 10, 2025
6b04f3b
Merge pull request #1301 from ORNL/release_February_2025
JoshuaSBrown Feb 11, 2025
e9cb85d
Merge hotfixes into devel (#1326)
t-ramz Feb 17, 2025
c62011d
Feature DAPS 1215 foxx UserGetAccessTokenRequest mapped collection su…
t-ramz Feb 18, 2025
1cf4921
[DLT-1110] Implement Consent Required Action (3/4 & 4/4) (#1242)
AronPerez Feb 18, 2025
1c7c155
JSON parse error fix (#1328)
t-ramz Feb 24, 2025
94f4d3a
Feature - Mapped Collection Token Support (#1334)
t-ramz Mar 6, 2025
b1e9f5f
Add small fix for storeCollectionId (#1341)
t-ramz Mar 11, 2025
12d339b
Fix bug with playwright (#1343)
JoshuaSBrown Mar 11, 2025
9da6616
[DAPS-1330] Address Download Extension Transfer (#1340)
AronPerez Mar 12, 2025
9ca68e0
Parse md json strings (#1347)
t-ramz Mar 12, 2025
8cb53b7
[DAPS-1349] Provenance Capture Update Bug (#1350)
AronPerez Apr 1, 2025
307804a
[Release] February 2025 (#1352)
nedvedba Apr 7, 2025
403636d
Add .venv/ to gitignore (#1335)
theodore-s-beers Apr 7, 2025
8e60d89
[DAPS-1388] Add GCP Support (#1392)
AronPerez May 2, 2025
80239fa
Add missing python module (#1404)
JoshuaSBrown May 5, 2025
7dcd3a6
Set reasonable default that will help with filling in repo form for c…
JoshuaSBrown May 5, 2025
d619edd
Add documentation describing how to test the foxx microservices unit …
JoshuaSBrown May 13, 2025
06d4aff
Fix ci build (#1390)
JoshuaSBrown May 13, 2025
3de35d9
Fix regression (#1428)
JoshuaSBrown May 14, 2025
ae60a80
Fix docker logs output in end-to-end tests (#1426)
JoshuaSBrown May 14, 2025
9475d28
Improve serialization randomization (#1427)
JoshuaSBrown May 14, 2025
b507329
Upgrade formatter (#1440)
JoshuaSBrown May 21, 2025
5b44b03
1437 fix zmq inproc bind order (#1438)
JoshuaSBrown May 22, 2025
6b731b1
Allow looping over containers if there is more than one. (#1446)
JoshuaSBrown May 22, 2025
9fde1df
1445 docker logs multiple containers (#1447)
JoshuaSBrown May 22, 2025
6dd23eb
Fix conflicting dependency install flags (#1444)
JoshuaSBrown May 22, 2025
bd10480
[DAPS-1408] Provenance Visual Management Lint (1/2) (#1431)
AronPerez May 22, 2025
6d4d3b1
[DAPS-1395] Address Memory Leaks in Core Server (#1424)
JoshuaSBrown May 23, 2025
4889e4d
[TASK] Update tests and fixture (#1454)
AronPerez May 23, 2025
3994abf
[DAPS-1331] Collection ID Updated on restart (#1468)
AronPerez Jun 9, 2025
926783b
[Release] v3.13.01 Resolve Devel Branch Diff (#1486)
AronPerez Jun 12, 2025
d0e346d
formatting(foxx) ran prettier fix (#1506)
nedvedba Jul 3, 2025
c526d6d
-Dependency_install_functions.sh (#1507)
megatnt1122 Jul 3, 2025
4727e50
freature(github action): Add shell-formatter check (#1509)
JoshuaSBrown Jul 3, 2025
433fce1
feat(yaml formatter): added yaml formatter check action file. (#1511)
JoshuaSBrown Jul 3, 2025
19cbd8d
Security updates to containers (#1336)
nedvedba Jul 3, 2025
9c7e6b1
fix:Changed the base image from focal:ubuntu to debian:bookworm-slim …
megatnt1122 Jul 14, 2025
5c67d12
fix: make protobuf file generation and compile order explicit to prev…
JoshuaSBrown Jul 23, 2025
5e5dd29
fix: add unauthorized error check in ci infrastructure job check. (#1…
JoshuaSBrown Jul 28, 2025
c451953
Austin remove dead code (#1526)
megatnt1122 Jul 30, 2025
b78e8c9
fix: Added appropriate move to AuthenticationManager (#1548)
megatnt1122 Jul 31, 2025
a557678
[DAPS-1529] Rework generate env script (#1545)
nedvedba Aug 5, 2025
b4550d7
fix: promotion logic in promotion core service condition (#1552)
JoshuaSBrown Aug 7, 2025
8078581
refactor - fix exception messages in resetKey, setAccessCount, getAcc…
JoshuaSBrown Aug 7, 2025
977547c
[TASK] Format yaml (#1569)
AronPerez Aug 7, 2025
2ab4dd9
fix:Fixed the double free issue within the GlobusAPI constructor and …
megatnt1122 Aug 8, 2025
b2a7e14
[DAPS-1551] ci job fail correctly on failed curl (#1556)
JoshuaSBrown Aug 9, 2025
b972c9a
fix: memory bug fixed in Condition.hpp and AuthenticationManager (#1574)
JoshuaSBrown Aug 13, 2025
956df25
refactor: remove useless secret from user_router. (#1577)
JoshuaSBrown Aug 13, 2025
e179992
style: Formatted ci scripts (#1584)
megatnt1122 Aug 13, 2025
bf80463
style:formatted the admin_get_user_emails.sh with shtmf (#1571)
megatnt1122 Aug 13, 2025
9a7d221
style: Formatted clear_db.sh (#1587)
megatnt1122 Aug 13, 2025
18ecc11
1596 daps feat support core service openshift (#1600)
JoshuaSBrown Aug 15, 2025
4142ce8
style: Formatted admin_update_config_message.sh (#1583)
megatnt1122 Aug 15, 2025
f757f82
refactor: remove system secret from http params. (#1597)
JoshuaSBrown Aug 18, 2025
3f62b4d
[DAPS-1568] Formatted generate scripts (#1591)
megatnt1122 Aug 18, 2025
2534c29
[DAPS-1572] Centralize timeout values using env variable within end-t…
megatnt1122 Aug 19, 2025
5965e8c
[TASK] Update script for GCS (#1607)
AronPerez Aug 20, 2025
4f17d2d
style: Formatted export_dependency_version (#1590)
megatnt1122 Aug 20, 2025
dd4782f
[DAPS-1568] Formatted globus scripts (#1595)
megatnt1122 Aug 20, 2025
22cb0d2
[DAPS-1568] Formatted run scripts (#1593)
megatnt1122 Aug 20, 2025
d2240ce
style: Formatted compose scripts (#1586)
megatnt1122 Aug 20, 2025
73a2fe2
style: Formatted admin_toggle_user_acccount.sh (#1582)
megatnt1122 Aug 21, 2025
9754c02
style:properly formatted admin_send_email_notification.sh (#1581)
megatnt1122 Aug 21, 2025
1c2a102
style: Formatted containter scripts (#1588)
megatnt1122 Aug 21, 2025
d2f05ca
[DAPS-1531] refactor useless secret user router part 3 (#1611)
JoshuaSBrown Aug 23, 2025
80acbfc
[DAPS-1522] Arango Removing Unneccessary Logs (#1601)
megatnt1122 Aug 23, 2025
c924ca6
[DAPS-1568] Formatted uninstall and util scripts (#1594)
megatnt1122 Aug 23, 2025
91cd587
[DAPS-1568] Formatting install scripts (#1592)
megatnt1122 Aug 25, 2025
e59b7ba
style:Formatted dependency scripts (#1589)
megatnt1122 Aug 25, 2025
072041d
Formatting remaining scripts within DataFed (#1613)
megatnt1122 Aug 26, 2025
41cb908
[DAPS-1605] feature openshift support foxx (#1606)
JoshuaSBrown Aug 27, 2025
557de72
fix: make secret optional before removing completely. (#1617)
JoshuaSBrown Aug 27, 2025
706ab18
[TASK] Update JS and Shell CI's to Format and Commit (#1620)
AronPerez Aug 27, 2025
ba743ac
[DAPS-1531] Init
AronPerez Jul 16, 2025
2e34446
[DAPS-1531] Update comments
AronPerez Jul 18, 2025
5f1741f
[DAPS-1531] Address CI
AronPerez Jul 21, 2025
3195244
[DAPS-1531] Object to object
AronPerez Jul 21, 2025
d849f6e
[DAPS-1531] Address Object -> object, address copilot comments
AronPerez Jul 21, 2025
5bc2e95
Revert "[DAPS-1531] Init"
AronPerez Jul 28, 2025
8061562
[DAPS-1513] Design Pattern Translation: Convert Repository Factory to…
AronPerez Jul 28, 2025
dd239fa
[DAPS-1514] Add repository validation logic with tests (#1539)
AronPerez Aug 12, 2025
7c755f9
[DAPS-1513] Address pr comments
AronPerez Aug 25, 2025
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2 changes: 2 additions & 0 deletions .flake8
Original file line number Diff line number Diff line change
@@ -0,0 +1,2 @@
[flake8]
max-line-length = 100
48 changes: 48 additions & 0 deletions .github/ISSUE_TEMPLATE/bug-report-template.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,48 @@
---
name: Bug Report Template
about: Create a report to help us improve
title: "[Bug]"
labels: 'Type: Bug'
assignees: ''

---

## Description

<!--- A clear and concise description of what the bug is. -->

## Steps to Replicate
<!---
1. Go to '...'
2. Click on '....'
3. Scroll down to '....'
4. See error
-->

### Additional context
<!--- Add any other context about the problem here. -->

Page occured:

<!---
Desktop (please complete the following information):
- OS: [e.g. iOS]
- Browser [e.g. chrome, safari]
- Version [e.g. 22]
-->

<!---
Smartphone (please complete the following information):
- Device: [e.g. iPhone6]
- OS: [e.g. iOS8.1]
- Browser [e.g. stock browser, safari]
- Version [e.g. 22]
-->

### Expected behavior

<!--- A clear and concise description of what you expected to happen. -->

## Artifacts (if appropriate):

<!--- Include videos, pictures, or copy text of the bugs occurance -->
26 changes: 26 additions & 0 deletions .github/ISSUE_TEMPLATE/development-issue-template.md
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---
name: Development Issue Template
about: Describe this issue template's purpose here.
title: ''
labels: ''
assignees: ''

---

## Ticket

<!--- Put ticket # if JIRA or name if Gitlab and link -->  

## Description

<!--- Describe your changes in detail -->

## Acceptance Criteria

<!--- Please describe the necessary acceptance criteria for development to be complete -->

## Resources (optional):

<!--- Include resoruces that will be helpful of necessary to complete the work -->

<!--- These can be links, documents, or just guiding principles -->
20 changes: 20 additions & 0 deletions .github/ISSUE_TEMPLATE/feature-request-template.md
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---
name: Feature request template
about: Suggest an idea for this project
title: "[Feature]"
labels: 'Type: New Feature'
assignees: ''

---

## Problem We Want to Solve
<!--- A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] -->

## Describe the Solution You'd Like
<!--- A clear and concise description of what you want to happen. -->

## Alternatives (optional)
<!--- A clear and concise description of any alternative solutions or features you've considered. -->

## Additional context
<!--- Add any other context or screenshots about the feature request here. -->
21 changes: 19 additions & 2 deletions .github/pull_request_template.md
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@@ -1,7 +1,24 @@
# PR Description
## Ticket

<!--- Put ticket # if JIRA or name if Gitlab and link -->  

# Tasks
## Description

<!--- Describe your changes in detail -->

## How Has This Been Tested?

<!--- Please describe in detail how you tested your changes. -->

<!--- Include details of your testing environment, and the tests you ran to -->

<!--- see how your change affects other areas of the code, etc. -->

## Artifacts (if appropriate):

<!--- Include videos and pictures that validate your work -->

## Tasks

* [ ] - A description of the PR has been provided, and a diagram included if it is a new feature.
* [ ] - Formatter has been run
Expand Down
24 changes: 12 additions & 12 deletions .github/workflows/apply-formatting.yml
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@@ -1,15 +1,15 @@
name: Command Mode Formatting
on:
issue_comment:
types: [created]
issue_comment:
types: [created]
jobs:
apply-formatting:
name: Format Py and C++ Code
runs-on: ubuntu-latest
if: startsWith(github.event.comment.body, '@par-hermes format')
steps:
- uses: JoshuaSBrown/cpp-py-formatter/command@v0.2.3
with:
botName: par-hermes
clangFormatVersion: 10
token: ${{ secrets.GITHUB_TOKEN }}
apply-formatting:
name: Format Py and C++ Code
runs-on: ubuntu-latest
if: startsWith(github.event.comment.body, '@par-hermes format')
steps:
- uses: JoshuaSBrown/cpp-py-formatter/command@v0.3.8
with:
botName: par-hermes
clangFormatVersion: 10
token: ${{ secrets.GITHUB_TOKEN }}
103 changes: 51 additions & 52 deletions .github/workflows/build-docs.yml
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Expand Up @@ -2,65 +2,64 @@
name: Build and deploy documentation

on:
# Runs on pushes targeting the default branch
push:
branches: ["master"]
# Runs on pushes targeting the default branch
push:
branches: ["master"]

# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:

# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
permissions:
contents: read
pages: write
id-token: write
contents: read
pages: write
id-token: write

# Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued.
# However, do NOT cancel in-progress runs as we want to allow these production deployments to complete.
concurrency:
group: "pages"
cancel-in-progress: false
group: "pages"
cancel-in-progress: false

jobs:
# Single deploy job since we're just deploying
deploy:
environment:
name: github-pages
url: ${{ steps.deployment.outputs.page_url }}
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: generate config file
run: |
./scripts/generate_datafed.sh
- name: Install documentation build dependencies
run: |
sudo ./scripts/install_docs_dependencies.sh
- name: Build documentation
run: |
cmake -S. -B build -DBUILD_AUTHZ=OFF -DBUILD_CORE_SERVER=OFF -DBUILD_COMMON=OFF -DBUILD_DOCS=ON -DBUILD_FOXX=OFF -DBUILD_REPO_SERVER=OFF -DBUILD_PYTHON_CLIENT=ON -DBUILD_TESTS=OFF -DBUILD_WEB_SERVER=OFF -DENABLE_UNIT_TESTS=OFF
- name: Build cmake pydatafed target
run: |
cmake --build build --target pydatafed
- name: Install pydatafed and depdencies
run: |
python3 -m pip install ./python/datafed_pkg
- name: Build cmake doc target
run: |
cmake --build build --target docs
- name: Setup Pages
uses: actions/configure-pages@v3
- name: Upload artifact
uses: actions/upload-pages-artifact@v2
with:
# Upload entire repository
path: './docs'
- name: Deploy to GitHub Pages
id: deployment
uses: actions/deploy-pages@v2

# Single deploy job since we're just deploying
deploy:
environment:
name: github-pages
url: ${{ steps.deployment.outputs.page_url }}
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: generate config file
run: |
./scripts/generate_datafed.sh
- name: Install documentation build dependencies
run: |
sudo ./scripts/install_docs_dependencies.sh
- name: Build documentation
run: |
cmake -S. -B build -DBUILD_AUTHZ=OFF -DBUILD_CORE_SERVER=OFF -DBUILD_COMMON=OFF -DBUILD_DOCS=ON -DBUILD_FOXX=OFF -DBUILD_REPO_SERVER=OFF -DBUILD_PYTHON_CLIENT=ON -DBUILD_TESTS=OFF -DBUILD_WEB_SERVER=OFF -DENABLE_UNIT_TESTS=OFF
- name: Build cmake pydatafed target
run: |
cmake --build build --target pydatafed
- name: Install pydatafed and depdencies
run: |
python3 -m pip install ./python/datafed_pkg
- name: Build cmake doc target
run: |
cmake --build build --target docs
- name: Setup Pages
uses: actions/configure-pages@v3
- name: Upload artifact
uses: actions/upload-pages-artifact@v2
with:
# Upload entire repository
path: "./docs"
- name: Deploy to GitHub Pages
id: deployment
uses: actions/deploy-pages@v2
37 changes: 0 additions & 37 deletions .github/workflows/format-check.yml
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@@ -1,37 +0,0 @@
name: Format Check
on: push
jobs:
check-formatting:
name: Code Formatting
runs-on: ubuntu-latest
steps:
- uses: JoshuaSBrown/cpp-py-formatter/check@v0.2.3
with:
clangFormatVersion: 10
token: ${{ secrets.GITHUB_TOKEN }}

format-check:
runs-on: ubuntu-latest
if: ${{ always() }}
# needs: check-formatting
strategy:
matrix:
python-version: [ "3.9" ]
steps:
- uses: actions/checkout@v2
- name: Update ubuntu
run: sudo apt-get update
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt-get install -y python3-sphinx sphinx-rtd-theme-common
pip install sphinx_rtd_theme recommonmark flake8 black pytest pytest-cov black[jupyter]
- name: Black formatting checks
run: black --exclude '/jupyter_notebooks/' --check .
- name: Lint with flake8
run: |
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics --max-line-length 100 .
flake8 --count --statistics --max-line-length 100 .
55 changes: 55 additions & 0 deletions .github/workflows/javascript-format.yml
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name: JavaScript Formatter
on: push
jobs:
format-javascript:
runs-on: ubuntu-latest

steps:
# Step 1: Checkout the repository
- name: Checkout Code
uses: actions/checkout@v4
with:
token: ${{ secrets.GITHUB_TOKEN }}
ref: ${{ github.head_ref || github.ref }}

# Step 2: Set up Node.js environment
- name: Set up Node.js
uses: actions/setup-node@v4
with:
node-version: "18"

# Step 3: Install Prettier
- name: Install Prettier
run: npm install -g prettier

# Step 4: Run Prettier to format code
- name: Format JavaScript files
run: |
echo "Auto-formatting JavaScript files..."
prettier "**/*.js" --write
echo "Formatting complete"

# Step 5: Check for changes and commit if needed
- name: Commit changes
run: |
# Get the original commit author info
AUTHOR_NAME=$(git log -1 --pretty=format:'%an')
AUTHOR_EMAIL=$(git log -1 --pretty=format:'%ae')

# Use original author for the formatting commit
git config --local user.email "$AUTHOR_EMAIL"
git config --local user.name "$AUTHOR_NAME"

# Check if there are any changes
if [[ -n $(git status -s) ]]; then
echo "Formatting changes detected, creating commit..."
echo "Committing as: $AUTHOR_NAME <$AUTHOR_EMAIL>"
git add -A
git commit -m "chore: Auto-format JavaScript files with Prettier"

# Push changes
git push
echo "Changes committed and pushed"
else
echo "No formatting changes needed"
fi
27 changes: 27 additions & 0 deletions .github/workflows/javascript-lint.yml
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name: JavaScript Linter
on: push
jobs:
lint-javascript:
runs-on: ubuntu-latest

steps:
# Step 1: Checkout the repository
- name: Checkout Code
uses: actions/checkout@v4

# Step 2: Set up Node.js environment
- name: Set up Node.js
uses: actions/setup-node@v4
with:
node-version: "18" # MOre up to date version needed for linter

# Step 3: Instal ESLint and run
- name: Install ESLint
run: |
npm init -y
npm install eslint@latest @babel/eslint-parser@latest eslint-define-config globals eslint-plugin-jsdoc --save
npx eslint "**/*.js"

# Step 4: Report status
- name: Complete
run: echo "Linting completed successfully!"
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