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stop using Ubuntu 20.04 in GitHub Actions workflows, use Ubuntu 22.04 instead #4783
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b3d5a7d
stop using Ubuntu 20.4 in GitHub Actions workflows, use Ubuntu 22.04 …
boegel 8516e1c
use python3.6 command instead of python3 in workflow to run tests wit…
boegel 796df9a
use --filter-deps in end2end test in fedora-41 or ubuntu-24.04 contai…
boegel ccd481a
remove custom workflow for running test suite with Python 3.6, will b…
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,82 @@ | ||
| # documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | ||
| name: EasyBuild framework unit tests (Python 3.6) | ||
| on: [push, pull_request] | ||
|
|
||
| permissions: | ||
| contents: read # to fetch code (actions/checkout) | ||
|
|
||
| concurrency: | ||
| group: ${{format('{0}:{1}:{2}', github.repository, github.ref, github.workflow)}} | ||
| cancel-in-progress: true | ||
|
|
||
| jobs: | ||
| test_python36: | ||
| runs-on: ubuntu-22.04 | ||
| container: | ||
| # Ubuntu 20.04 container that already includes Python 3.6 + Lmod & co, | ||
| # see https://github.com/easybuilders/easybuild-containers | ||
| image: ghcr.io/easybuilders/ubuntu-20.04-python36-amd64 | ||
| steps: | ||
| - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # 4.2.2 | ||
|
|
||
| - name: install Python packages | ||
| run: | | ||
| # Python packages | ||
| python3.6 -V | ||
| python3.6 -m pip --version | ||
| python3.6 -m pip install --upgrade pip | ||
| python3.6 -m pip --version | ||
| python3.6 -m pip install -r requirements.txt | ||
| # git config is required to make actual git commits (cfr. tests for GitRepository) | ||
| sudo -u easybuild git config --global user.name "GitHub Actions" | ||
| sudo -u easybuild git config --global user.email "actions@github.com" | ||
| sudo -u easybuild git config --get-regexp 'user.*' | ||
|
|
||
| - name: install GitHub token (if available) | ||
| env: | ||
| # token (owned by @boegelbot) with gist permissions (required for some of the tests for GitHub integration); | ||
| # this token is not available in pull requests, so tests that require it are skipped in PRs, | ||
| # and are only run after the PR gets merged | ||
| GITHUB_TOKEN: ${{secrets.CI_UNIT_TESTS_GITHUB_TOKEN}} | ||
| run: | | ||
| # tests that require a GitHub token are skipped automatically when no GitHub token is available | ||
| if [ ! -z $GITHUB_TOKEN ]; then | ||
| sudo -u easybuild python3.6 -c "import keyring; import keyrings.alt.file; keyring.set_keyring(keyrings.alt.file.PlaintextKeyring()); keyring.set_password('github_token', 'easybuild_test', '$GITHUB_TOKEN')"; | ||
| echo "GitHub token installed!" | ||
| else | ||
| echo "Installation of GitHub token skipped!" | ||
| fi | ||
|
|
||
| - name: install sources | ||
| run: | | ||
| # install from source distribution tarball, to test release as published on PyPI | ||
| python3.6 setup.py sdist | ||
| ls dist | ||
| export PREFIX=/tmp/$USER/$GITHUB_SHA | ||
| python3.6 -m pip install --prefix $PREFIX dist/easybuild-framework*tar.gz | ||
|
|
||
| - name: run test suite | ||
| run: | | ||
| # run tests *outside* of checked out easybuild-framework directory, | ||
| # to ensure we're testing installed version (see previous step) | ||
| cd $HOME | ||
| # make sure 'eb' is available via $PATH, and that $PYTHONPATH is set (some tests expect that) | ||
| export PREFIX=/tmp/$USER/$GITHUB_SHA | ||
| ENV_CMDS="export PATH=$PREFIX/bin:$PATH; export PYTHONPATH=$PREFIX/lib/python3.6/site-packages:$PYTHONPATH" | ||
| ENV_CMDS="${ENV_CMDS}; export EB_VERBOSE=1; export EB_PYTHON=python3.6" | ||
| # run EasyBuild command via (non-root) easybuild user + login shell | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; module --version; eb --version" | ||
| # show active EasyBuild configuration | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; eb --show-config" | ||
| # gather some useful info on test system | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; eb --show-system-info" | ||
| # check GitHub configuration | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; eb --check-github --github-user=easybuild_test" | ||
| # create file owned by root but writable by anyone (used by test_copy_file) | ||
| sudo touch /tmp/file_to_overwrite_for_easybuild_test_copy_file.txt | ||
| sudo chmod o+w /tmp/file_to_overwrite_for_easybuild_test_copy_file.txt | ||
| # run test suite (via easybuild user + login shell) | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; python3.6 -O -m test.framework.suite" | ||
| # There may be encoding errors in Python 3 which are hidden when an UTF-8 encoding is set | ||
| # Hence run the tests (again) with LC_ALL=C and Python 3.6 (or any < 3.7) | ||
| sudo -u easybuild bash -l -c "${ENV_CMDS}; export LC_ALL=C; python3.6 -O -m test.framework.suite" |
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This failure on Ubuntu 24.04 can be avoided with
--filter-deps=binutilsLog file from a local build
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