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    • bio4j.com website
      HTML
      0003Updated Oct 12, 2020Oct 12, 2020
    • GenBank feature table ADT and parsers
      Scala
      GNU Affero General Public License v3.0
      0010Updated Jan 26, 2017Jan 26, 2017
    • Data import for standard open data
      Scala
      GNU Affero General Public License v3.0
      0091Updated Dec 19, 2016Dec 19, 2016
    • bio4j

      Public
      Bio4j abstract model and general entry point to the project
      Java
      GNU Affero General Public License v3.0
      1912251Updated Dec 16, 2016Dec 16, 2016
    • UniProt entry ADT and parsers
      Scala
      GNU Affero General Public License v3.0
      0160Updated Nov 10, 2016Nov 10, 2016
    • data.go

      Public
      Gene Ontology data ADT and parsers
      Scala
      GNU Affero General Public License v3.0
      0010Updated Nov 9, 2016Nov 9, 2016
    • UniRef data ADT and parsers
      Scala
      GNU Affero General Public License v3.0
      0000Updated Nov 9, 2016Nov 9, 2016
    • ENZYME data ADT and flat file parser
      Scala
      GNU Affero General Public License v3.0
      0010Updated Nov 5, 2016Nov 5, 2016
    • Java 8 library for strongly typed graph data
      Java
      GNU Affero General Public License v3.0
      2840Updated Oct 29, 2016Oct 29, 2016
    • Scala
      GNU Affero General Public License v3.0
      0021Updated Oct 18, 2016Oct 18, 2016
    • use Titan with a lot of angulillos
      Java
      GNU Affero General Public License v3.0
      1430Updated Oct 16, 2016Oct 16, 2016
    • xs4s

      Public
      XML Streaming for Scala
      Scala
      Other
      13000Updated Jun 7, 2016Jun 7, 2016
    • use Neo4j with a lot of angulillos!
      Java
      GNU Affero General Public License v3.0
      0020Updated May 16, 2016May 16, 2016
    • Titan-specific bio4j implementation
      Java
      2790Updated Mar 14, 2016Mar 14, 2016
    • modules

      Public
      Statika-based bio4j module system
      JavaScript
      GNU Affero General Public License v3.0
      0130Updated Mar 11, 2016Mar 11, 2016
    • Bio4j usage examples
      Java
      GNU Affero General Public License v3.0
      1611Updated Aug 31, 2015Aug 31, 2015
    • JSON serialization related classes for Bio4j entities used in Java programs
      Java
      GNU Affero General Public License v3.0
      0000Updated Apr 15, 2015Apr 15, 2015
    • Java
      GNU Affero General Public License v3.0
      0120Updated Mar 5, 2015Mar 5, 2015
    • gsoc15

      Public
      project ideas for Google Summer of Code 2015
      0320Updated Feb 20, 2015Feb 20, 2015
    • Scala
      GNU Affero General Public License v3.0
      0201Updated Feb 1, 2015Feb 1, 2015
    • Java
      GNU Affero General Public License v3.0
      0000Updated Dec 9, 2014Dec 9, 2014
    • Neo4j-specific implementation of Bio4j
      Java
      GNU Affero General Public License v3.0
      2632Updated Dec 4, 2014Dec 4, 2014
    • slides from the two bio4j sessions in the graph processing devroom
      JavaScript
      0000Updated Oct 8, 2014Oct 8, 2014
    • el-grafo

      Public
      GSoC 2014 project - D3-based Bio4j data model visualization
      JavaScript
      3482Updated Oct 1, 2014Oct 1, 2014
    • exporter

      Public
      GSoC 2014 project
      Java
      GNU Affero General Public License v3.0
      3300Updated Aug 22, 2014Aug 22, 2014
    • GSoC 2014 project - a DynamoDB based graph DB
      Scala
      GNU Affero General Public License v3.0
      1483Updated Aug 18, 2014Aug 18, 2014
    • distributed writing code for dynamograph
      Scala
      GNU Affero General Public License v3.0
      0100Updated Aug 17, 2014Aug 17, 2014
    • An http service to discover Bio4j doman model
      Scala
      GNU Affero General Public License v3.0
      0000Updated Jun 28, 2014Jun 28, 2014
    • Giter8 template for a new Bio4j module
      Scala
      0000Updated May 7, 2014May 7, 2014
    • Bio4j default Blueprints model implementation
      Java
      GNU Affero General Public License v3.0
      0100Updated May 7, 2014May 7, 2014
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